PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_000503-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 428aa    MW: 48027 Da    PI: 6.459
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_000503-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.62.2e-13216267155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +r++h ++Er+RR+++N+ ++ Lr+l+P++     ++ + a+i   A++++k+L+
  NNU_000503-RA 216 QRMTHIAVERNRRRQMNDHLNALRSLMPTS---FIQRGDQASIIGGAIDFVKELE 267
                    79***************************9...9******************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.75E-16206279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.94E-13214271No hitNo description
PROSITE profilePS5088815.586215266IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-14216278IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.2E-11216267IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-11221272IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MEKLQGPINP CGEKAFDFTH GSSLISTESF RLEEERKPFA IPSLQDKMPF LQMLQSVESP  60
TFTSLIEPSF QLLLRLQQQK PWGRNNWTEV DPCAQTLEPE SCITHDISEA YSPVKSETKI  120
THDISEAHST VKSETKEPHH PQSSSCLEVV SSACNVGPNS PENCGAENSG TPSNRVDDRL  180
MVKSSPQLTM PAPVTREKRK RKRTRPSKNK EEVETQRMTH IAVERNRRRQ MNDHLNALRS  240
LMPTSFIQRG DQASIIGGAI DFVKELEQLL QSLQAQKRIR KTEEEGNGDN SENHHNHRDP  300
DSSALPFNGF FISPQYTTYS SLASSDIKYT GEEEFTAENK SAVADIEVIV IHTHVNLKIL  360
SARRPGQLLK VIAALEDLRL TILHLNITSS QRSVLYSFNL KMEDDCKLGS ADEIAAAVHQ  420
VFSLINGQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1216227RMTHIAVERNRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010251348.10.0PREDICTED: transcription factor bHLH67-like
TrEMBLA5C9J31e-135A5C9J3_VITVI; Putative uncharacterized protein
TrEMBLF6I2Y81e-135F6I2Y8_VITVI; Putative uncharacterized protein
STRINGVIT_15s0048g02510.t011e-135(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.11e-71bHLH family protein